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11. Bioinorganic Chemistry

11. Bio-Inorganic Chemistry

🎯 Learning outcomes

Learners should be able to:

  • Explain bioinorganic chemistry and compare it with other branches of chemistry.
  • Define micro and macro nutrients with examples.
  • State and explain the importance of metal ions in biological systems (ions of Na, K, Mg, Ca, Fe, Cu, Zn, Ni, Co, Cr).
  • Elaborate ion pumps (sodium-potassium and sodium-glucose pumps).
  • Explain metal toxicity (toxicity due to iron, arsenic, mercury, lead, and cadmium).
11. Bio-Inorganic Chemistry
1 Introduction to Bioinorganic Chemistry
Bioinorganic chemistry is the branch of study that deals with the interaction of inorganic substances (mainly metal ions) and biological systems (living tissues) and their roles in life processes.

It explains things like:

  • How metal ions function in enzymes and proteins
  • How ions regulate biological activities like nerve transmission, oxygen transport, and metabolism
  • How imbalance or toxicity of metals affects health
2 Macronutrients

Macronutrients are chemicals required in large amounts in the range of grams in our daily diet for the proper functioning of the body.

💧 1. Water

  • Inorganic polar compound, the most abundant component of the human body (~60-70%)
  • Universal solvent, essential for metabolic reactions
  • Maintains body temperature
  • Helps in the transport of nutrients and waste removal
  • Acts as a lubricant (joints, eyes) and a shock absorber
  • Maintains osmotic pressure and cell structure

🍞 2. Carbohydrates

  • Polyhydroxy aldehydes or polyhydroxy ketones, or compounds that hydrolyse to form such substances.
  • Primary energy source of the body.
  • Excess is stored as glycogen or fat.
  • Sources: cereals, potatoes, bananas, honey, etc.

🥚 3. Proteins

  • Long-chain polymers of amino acids.
  • Main body building nutrients essential for growth, repair, and maintenance of tissues.
  • Form enzymes, hormones, antibodies, and transport molecules
  • Sources: Pulses, beans, legumes, meat, egg, fish, etc.

🥑 4. Fats

  • Provide high energy (double the carbohydrates)
  • Stored in adipose tissue for energy reserve
  • Help in absorption of fat-soluble vitamins (A, D, E, K)
  • Important for hormone synthesis and organ protection
  • Sources: Almond, walnut, pumpkin, sunflower, mustard seeds, etc.
3 Micronutrients

Micronutrients are the substances required in small amounts, much less than 1 g, for the proper functioning of the body (metabolism) and the prevention of diseases.

💊 1. Vitamins

Organic micronutrients. Essential to regulate metabolism, support immunity, and help growth and tissue repair. Act as cofactors or coenzymes in various biochemical reactions.

  • Water-soluble (Vitamins B complex and C): not stored in the body (must be taken regularly)
  • Fat-soluble (Vitamins A, D, E, & K): stored in fat and liver tissues.

⚛️ 2. Minerals

Minerals are the inorganic micronutrients that are required by the body in very small quantities.

Ex: Na, K, Mg, Ca, P, S, Fe, Zn, Cu, Mn, Co etc. Classified as micro and macro minerals.

  • Macro minerals are required in relatively large concentrations. E.g., Na, K, Mg, Ca, P, S, Cl, etc.
  • Micro-minerals are required in relatively small quantities. E.g., Fe, Zn, Cu, Mn, etc.

Main functions of minerals:

  • Enzyme activation
  • Oxygen transport
  • Nerve and muscle function
  • Hormone regulation
4 Importance of Metal Ions in Biological Systems
Functions of metals in biological systems: structural functions, regulation, electron transfer, oxygen transport, enzyme activation, nutrition

Sodium (Na)

The predominant extracellular cation in both animals and human beings.

Biochemical functions
  • Maintains osmotic pressure and cellular fluid balance
  • Controls nerve impulse transmission
  • Helps muscle contraction
Effects of deficiency
  • A low level of sodium in our blood may cause confusion, seizures, coma (severe cases)
  • Muscle cramps, nausea.

Main source: table/common salt, salted processed foods

Most people get more sodium than needed, often unknowingly, from processed/salted foods.

Potassium (K)

An electrolyte mineral as important as sodium. Most of the potassium in our bodies is located in the muscle cells.

Biochemical functions
  • Helps regulate fluid and electrolyte balance in the body and maintains osmotic pressure.
  • Adequate potassium intake helps lower blood pressure, hence reducing the risk of stroke, osteoporosis, and kidney stones.
Effects of deficiency
  • Fatigue and weakness in muscles.
  • Abnormal/irregular heartbeat (arrhythmia)

Main sources: bananas, vegetables, legumes, etc.

Unlike sodium, most people don’t get enough potassium.

Magnesium (Mg)

Magnesium is an important mineral for humans and plants. 99% of magnesium is located in intracellular fluids and bones.

Biochemical role
  • Acts as a cofactor for many enzymes involved in protein synthesis and metabolism
  • Essential for the stability and proper functioning of DNA and RNA.
  • Essential component of chlorophyll in plants, hence important for photosynthesis
Effects of deficiency
  • Muscle cramps, weakness, abnormal heartbeat (arrhythmia)
  • Can cause low levels of potassium (hypokalemia) and calcium (hypocalcemia)

Main source: Leafy green vegetables, nuts, whole grains

Calcium (Ca)

An essential element in all animals and human beings. ~99% of calcium exists as phosphate in the bones and teeth.

Biochemical role
  • Essential for the development, growth, and maintenance of bone, along with vitamin D
  • Required for blood clotting
  • Muscle contraction, nerve signalling
Effects of deficiency
  • Weak bones, osteoporosis
  • Poor dental structure

Main source: dairy products; leafy green vegetables

Iron (Fe)

The average human has about 4-5 g of Fe. About 60-70% is found in the haemoglobin (oxygen transporter) of red blood cells. About 3-5% is present in the muscle myoglobin (an oxygen carrier in the muscles). About 15% is stored as ferritin in the liver, spleen, and bone marrow.

Biochemical role
  • Transport of oxygen to the different parts of the body.
  • Acts as a cofactor of enzymes, where it helps in the catalytic role of the enzyme.
Effects of deficiency
  • Anemia

Main sources: red meat, poultry, spinach, legumes, etc.

Copper (Cu)

Found in all body tissues and is an essential nutrient for human survival. Found mainly in the liver, kidney, heart, and brain.

Biochemical role
  • Helps in the formation of red blood cells
  • Maintains nervous and immune systems
  • Functions as part of enzyme systems
Effects of deficiency
  • Weak immune system, low energy
  • Can lead to anaemia and neurological problems

Main source: chicken, meats, nuts, seeds, etc.

Zinc (Zn)

Located largely in the liver, bone, and muscles.

Biochemical role
  • Activation of T cells that attack the cancerous cells.
  • Healing of wounds
  • Growth and development
Effects of deficiency
  • Loss of appetite, slow wound healing
  • Growth retardation, hair loss, diarrhoea
  • Impaired reproductive function

Main sources: Meat (especially red meat), Fish and seafood, Legumes (beans and lentils)

Nickel (Ni)

The biological role of nickel is not yet fully established.

Biochemical role
  • May influence enzyme activity and nucleic acid metabolism
  • May assist in glucose metabolism
Effects of deficiency
  • May affect the absorption of iron and hence lead to anemia.

Main sources: legumes, grains, meat, fish, eggs, etc.

Cobalt (Co)

Component of Vitamin B₁₂.

Biochemical role
  • Required for red blood cell formation
  • Involved in the metabolism of fatty acids and amino acids
Effects of deficiency
  • Due to the lack of vitamin B12, it causes anemia.

Main sources: meat (liver), fish, milk

Chromium (Cr)

An adult human has about 4-6 mg of chromium.

Biochemical role
  • Enhances insulin action (glucose metabolism)
  • Helps regulate blood sugar levels
Deficiency of chromium
  • Impaired glucose tolerance
  • Weight loss, poor coordination

Main sources: whole-grains (e.g., wheat, oats), meat (especially liver), vegetables (e.g., broccoli, potatoes)

5 Sodium-Potassium Pump

The sodium–potassium pump is a membrane protein (carrier protein) that actively transports:

  • 3 Na⁺ ions out of the cell
  • 2 K⁺ ions into the cell

using energy from the conversion of ATP to ADP.

➢ An example of primary active transport

Inside and outside the cell, ion concentrations are different:

  • Outside cell: High Na⁺, low K⁺
  • Inside cell: High K⁺, low Na⁺

But the cell must maintain this imbalance for:

  • Nerve impulse transmission
  • Muscle contraction
  • Cell volume control
  • Electrical stability (membrane potential)

So the pump works continuously to maintain this balance.

The mechanism of the Na-K pump is explained in four steps:

1. 3 Na⁺ ions from inside the cell bind to the carrier (pump) protein.

2. ATP is broken into ADP + Pi (phosphate). Energy causes the pump protein to change shape.

3. The shape change forces 3 Na⁺ ions to move outside the cell.

4. Now 2 K⁺ ions from outside bind to the pump.

5. Phosphate group is removed. Pump returns to original shape.

6. 2 K⁺ ions are released into the cell.

Sodium-potassium pump 4-panel diagram showing ATP binding, sodium release, and potassium binding steps

Think of it like a “door system”:

  • First door opens → Na⁺ goes OUT
  • Then reset → K⁺ comes IN

But the pump is unequal (3 out, 2 in) → this creates an electrical charge difference

Why is the Na-K pump important?

1. Maintains resting membrane potential
  • Inside the cell, the potential becomes more negative
  • Needed for nerve impulse firing
2. Helps nerve signal transmission
  • Without it, neurons cannot reset
3. Controls cell volume
  • Prevents cell swelling or bursting
4. Supports muscle contraction
  • Especially the heart and skeletal muscles
6 Sodium-Glucose Pump
What?

An example of secondary active transport. Uses Na⁺ gradient energy. Glucose is transported into the cell against its concentration gradient.

Why?

Glucose is very important for energy production, but in many cases:

  • Glucose concentration inside the cell is already high
  • So, glucose must enter against its concentration gradient

But glucose cannot do this alone.

How?
  • The Na⁺/K⁺ pump maintains a gradient with high Na⁺ outside and low Na⁺ inside the cell.
  • A carrier protein (symporter) in the membrane has binding sites for both Na⁺ and glucose.
  • Na⁺ binds first, which helps glucose also bind to the same carrier protein.
  • Binding causes a shape (conformational) change, allowing both Na⁺ and glucose to enter the cell.
  • Inside the cell, Na⁺ moves down its gradient, providing energy, and both molecules are released; the carrier resets.
Cotransport diagram showing Na-K pump and coupled transport protein with sodium and sugar
Six-step sodium-glucose pump mechanism diagram showing carrier protein binding sodium and glucose

Biological Importance of Na-Glucose Pump

1. Absorption in the intestine

Helps absorb glucose from food in the small intestine

2. Kidney function

Reabsorbs glucose from the filtrate in the kidneys

3. Energy supply

Ensures glucose is efficiently taken into cells for respiration

7 Metal Toxicity
Heavy metal toxicity is the accumulation of toxic amounts of metals in the soft tissues of the body, leading to harmful effects.

Iron Poisoning

Most common cause of fatal metal poisoning in children (<6 years)

Symptoms
  • Chronic fatigue
  • Joint and abdominal pain
  • Liver disease (cirrhosis)
  • Diabetes mellitus
  • Heart failure
  • Skin discoloration (bronze/grey tone)

Arsenic Toxicity

Source: Contaminated groundwater

Acute exposure
  • Vomiting
  • Abdominal pain
  • Watery (sometimes bloody) diarrhea
  • Encephalopathy
Chronic exposure
  • Skin thickening and darkening
  • Numbness
  • Heart disease
  • Cancer risk

Mercury Poisoning

Key disease: Minamata disease

Symptoms
  • Muscle weakness
  • Poor coordination
  • Numbness in hands and feet
  • Memory problems
  • Anxiety
  • Kidney damage
  • Intellectual impairment

Lead Poisoning

Symptoms
  • Abdominal pain and constipation
  • Headache, irritability
  • Memory problems
  • Tingling in hands and feet
Severe cases
  • Anaemia
  • Seizures
  • Coma or death

Cadmium Poisoning

Acute exposure (inhalation)
  • Flu-like symptoms (fever, chills, muscle pain)
  • Lung damage
Chronic exposure
  • Kidney damage
  • Bone weakness (osteoporosis)
  • Lung disease

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